Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND4P03905 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND4P03905 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
MT-ND4P03905 DUX4L11-201ENST00000611504 1267 ntBASIC20.62■□□□□ 0.89
MT-ND4P03905 DUX4L12-201ENST00000614593 1267 ntBASIC20.62■□□□□ 0.89
MT-ND4P03905 DUX4L14-201ENST00000621227 1267 ntBASIC20.62■□□□□ 0.89
MT-ND4P03905 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND4P03905 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
MT-ND4P03905 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND4P03905 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
MT-ND4P03905 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND4P03905 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND4P03905 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND4P03905 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
MT-ND4P03905 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND4P03905 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND4P03905 AC079834.2-201ENST00000609776 1949 ntBASIC20.61■□□□□ 0.89
MT-ND4P03905 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-ND4P03905 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-ND4P03905 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
MT-ND4P03905 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND4P03905 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND4P03905 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND4P03905 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND4P03905 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND4P03905 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND4P03905 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
MT-ND4P03905 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MT-ND4P03905 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND4P03905 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND4P03905 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND4P03905 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.59■□□□□ 0.89
MT-ND4P03905 ZNRF2P2-203ENST00000454624 420 ntBASIC20.59■□□□□ 0.89
MT-ND4P03905 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND4P03905 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND4P03905 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND4P03905 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND4P03905 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MT-ND4P03905 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND4P03905 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND4P03905 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND4P03905 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.58■□□□□ 0.89
MT-ND4P03905 AC008813.1-201ENST00000536597 885 ntBASIC20.58■□□□□ 0.89
MT-ND4P03905 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND4P03905 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MT-ND4P03905 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
MT-ND4P03905 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND4P03905 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND4P03905 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MT-ND4P03905 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND4P03905 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND4P03905 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MT-ND4P03905 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.57■□□□□ 0.88
MT-ND4P03905 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.57■□□□□ 0.88
MT-ND4P03905 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND4P03905 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND4P03905 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND4P03905 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND4P03905 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND4P03905 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND4P03905 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
MT-ND4P03905 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND4P03905 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND4P03905 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MT-ND4P03905 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND4P03905 AC097639.1-201ENST00000565519 1891 ntBASIC20.56■□□□□ 0.88
MT-ND4P03905 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
MT-ND4P03905 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.55■□□□□ 0.88
MT-ND4P03905 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
MT-ND4P03905 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND4P03905 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.54■□□□□ 0.88
MT-ND4P03905 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
MT-ND4P03905 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND4P03905 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MT-ND4P03905 LINC00543-201ENST00000567234 1845 ntBASIC20.53■□□□□ 0.88
MT-ND4P03905 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND4P03905 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND4P03905 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND4P03905 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.53■□□□□ 0.88
MT-ND4P03905 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MT-ND4P03905 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND4P03905 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND4P03905 AC148477.6-201ENST00000623746 465 ntBASIC20.52■□□□□ 0.88
MT-ND4P03905 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
MT-ND4P03905 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
MT-ND4P03905 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MT-ND4P03905 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND4P03905 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms