Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.32■■□□□ 1.16
CLPTM1O96005 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CLPTM1O96005 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLPTM1O96005 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLPTM1O96005 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CLPTM1O96005 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.31■■□□□ 1.16
CLPTM1O96005 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLPTM1O96005 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLPTM1O96005 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.3■■□□□ 1.16
CLPTM1O96005 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLPTM1O96005 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.3■■□□□ 1.16
CLPTM1O96005 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLPTM1O96005 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLPTM1O96005 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CLPTM1O96005 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.3■■□□□ 1.16
CLPTM1O96005 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CLPTM1O96005 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLPTM1O96005 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.29■■□□□ 1.16
CLPTM1O96005 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLPTM1O96005 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLPTM1O96005 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLPTM1O96005 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLPTM1O96005 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLPTM1O96005 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLPTM1O96005 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.28■■□□□ 1.16
CLPTM1O96005 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPTM1O96005 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.28■■□□□ 1.16
CLPTM1O96005 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPTM1O96005 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPTM1O96005 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLPTM1O96005 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CLPTM1O96005 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CLPTM1O96005 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPTM1O96005 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPTM1O96005 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.27■■□□□ 1.16
CLPTM1O96005 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPTM1O96005 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPTM1O96005 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPTM1O96005 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
CLPTM1O96005 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CLPTM1O96005 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CLPTM1O96005 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLPTM1O96005 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.26■■□□□ 1.15
CLPTM1O96005 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLPTM1O96005 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.26■■□□□ 1.15
CLPTM1O96005 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.26■■□□□ 1.15
CLPTM1O96005 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.26■■□□□ 1.15
CLPTM1O96005 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPTM1O96005 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 AC096887.2-201ENST00000623443 1957 ntBASIC22.25■■□□□ 1.15
CLPTM1O96005 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CLPTM1O96005 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 MIR7108-201ENST00000614319 87 ntBASIC22.25■■□□□ 1.15
CLPTM1O96005 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPTM1O96005 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPTM1O96005 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPTM1O96005 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CLPTM1O96005 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.24■■□□□ 1.15
CLPTM1O96005 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CLPTM1O96005 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPTM1O96005 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPTM1O96005 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPTM1O96005 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPTM1O96005 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPTM1O96005 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPTM1O96005 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLPTM1O96005 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPTM1O96005 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CLPTM1O96005 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPTM1O96005 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.22■■□□□ 1.15
CLPTM1O96005 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.22■■□□□ 1.15
CLPTM1O96005 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPTM1O96005 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPTM1O96005 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPTM1O96005 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLPTM1O96005 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.22■■□□□ 1.15
CLPTM1O96005 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.21■■□□□ 1.15
CLPTM1O96005 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CLPTM1O96005 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLPTM1O96005 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.21■■□□□ 1.15
CLPTM1O96005 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms