Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.39■□□□□ 0.05
HERC2O95714 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HERC2O95714 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.39■□□□□ 0.05
HERC2O95714 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HERC2O95714 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HERC2O95714 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HERC2O95714 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HERC2O95714 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HERC2O95714 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.38■□□□□ 0.05
HERC2O95714 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HERC2O95714 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HERC2O95714 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.38■□□□□ 0.05
HERC2O95714 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HERC2O95714 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.37■□□□□ 0.05
HERC2O95714 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.37■□□□□ 0.05
HERC2O95714 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.37■□□□□ 0.05
HERC2O95714 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HERC2O95714 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HERC2O95714 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HERC2O95714 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HERC2O95714 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HERC2O95714 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HERC2O95714 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.36■□□□□ 0.05
HERC2O95714 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HERC2O95714 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.36■□□□□ 0.05
HERC2O95714 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HERC2O95714 MEST-211ENST00000437945 1455 ntTSL 5 BASIC15.36■□□□□ 0.05
HERC2O95714 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HERC2O95714 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HERC2O95714 RAP2CP1-201ENST00000605103 478 ntBASIC15.36■□□□□ 0.05
HERC2O95714 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.35■□□□□ 0.05
HERC2O95714 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.35■□□□□ 0.05
HERC2O95714 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.35■□□□□ 0.05
HERC2O95714 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HERC2O95714 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HERC2O95714 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.35■□□□□ 0.05
HERC2O95714 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.35■□□□□ 0.05
HERC2O95714 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HERC2O95714 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HERC2O95714 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HERC2O95714 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.34■□□□□ 0.05
HERC2O95714 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.34■□□□□ 0.05
HERC2O95714 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.34■□□□□ 0.05
HERC2O95714 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.34■□□□□ 0.05
HERC2O95714 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HERC2O95714 AL161658.1-201ENST00000623641 1967 ntBASIC15.34■□□□□ 0.05
HERC2O95714 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HERC2O95714 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.34■□□□□ 0.05
HERC2O95714 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HERC2O95714 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC2O95714 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.33■□□□□ 0.04
HERC2O95714 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC2O95714 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC2O95714 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.32■□□□□ 0.04
HERC2O95714 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC15.32■□□□□ 0.04
HERC2O95714 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HERC2O95714 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 AC093827.2-201ENST00000512654 315 ntBASIC15.32■□□□□ 0.04
HERC2O95714 AP002414.2-202ENST00000590929 1450 ntBASIC15.32■□□□□ 0.04
HERC2O95714 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC2O95714 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.32■□□□□ 0.04
HERC2O95714 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.32■□□□□ 0.04
HERC2O95714 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC2O95714 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC2O95714 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC2O95714 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HERC2O95714 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC2O95714 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.31■□□□□ 0.04
HERC2O95714 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC2O95714 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC2O95714 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC2O95714 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC2O95714 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.3■□□□□ 0.04
HERC2O95714 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.3■□□□□ 0.04
HERC2O95714 MIR4281-201ENST00000580852 62 ntBASIC15.3■□□□□ 0.04
HERC2O95714 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.29■□□□□ 0.04
HERC2O95714 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.29■□□□□ 0.04
HERC2O95714 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC2O95714 AC008687.6-201ENST00000596318 630 ntBASIC15.29■□□□□ 0.04
HERC2O95714 YBX1P1-201ENST00000445822 960 ntBASIC15.28■□□□□ 0.04
HERC2O95714 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L2-201ENST00000561772 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L6-201ENST00000626483 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L1-201ENST00000627662 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L8-201ENST00000629013 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L3-201ENST00000630187 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L7-201ENST00000630678 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 DUX4L5-201ENST00000630834 1275 ntBASIC15.28■□□□□ 0.04
HERC2O95714 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.28■□□□□ 0.04
HERC2O95714 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HERC2O95714 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms