Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD2O60906 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD2O60906 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD2O60906 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD2O60906 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD2O60906 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SMPD2O60906 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD2O60906 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD2O60906 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMPD2O60906 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD2O60906 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD2O60906 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.89■□□□□ 0.93
SMPD2O60906 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.89■□□□□ 0.93
SMPD2O60906 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD2O60906 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD2O60906 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.89■□□□□ 0.93
SMPD2O60906 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD2O60906 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.88■□□□□ 0.93
SMPD2O60906 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SMPD2O60906 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.88■□□□□ 0.93
SMPD2O60906 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD2O60906 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD2O60906 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD2O60906 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD2O60906 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD2O60906 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD2O60906 AC092803.2-201ENST00000564287 1899 ntBASIC20.88■□□□□ 0.93
SMPD2O60906 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.87■□□□□ 0.93
SMPD2O60906 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMPD2O60906 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD2O60906 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD2O60906 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD2O60906 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMPD2O60906 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.87■□□□□ 0.93
SMPD2O60906 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMPD2O60906 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD2O60906 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.86■□□□□ 0.93
SMPD2O60906 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMPD2O60906 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SMPD2O60906 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMPD2O60906 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD2O60906 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.86■□□□□ 0.93
SMPD2O60906 AC103724.3-201ENST00000564481 992 ntBASIC20.86■□□□□ 0.93
SMPD2O60906 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.86■□□□□ 0.93
SMPD2O60906 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD2O60906 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMPD2O60906 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.86■□□□□ 0.93
SMPD2O60906 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD2O60906 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMPD2O60906 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.85■□□□□ 0.93
SMPD2O60906 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD2O60906 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD2O60906 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD2O60906 AC091060.1-201ENST00000623524 1766 ntBASIC20.85■□□□□ 0.93
SMPD2O60906 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMPD2O60906 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.84■□□□□ 0.93
SMPD2O60906 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD2O60906 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.84■□□□□ 0.93
SMPD2O60906 AL356441.2-201ENST00000443009 864 ntBASIC20.84■□□□□ 0.93
SMPD2O60906 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD2O60906 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMPD2O60906 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD2O60906 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.83■□□□□ 0.93
SMPD2O60906 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMPD2O60906 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD2O60906 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
SMPD2O60906 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD2O60906 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD2O60906 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.83■□□□□ 0.92
SMPD2O60906 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMPD2O60906 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
SMPD2O60906 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD2O60906 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 ERN1-208ENST00000606895 2068 ntBASIC20.81■□□□□ 0.92
SMPD2O60906 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.81■□□□□ 0.92
SMPD2O60906 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.81■□□□□ 0.92
SMPD2O60906 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.81■□□□□ 0.92
SMPD2O60906 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.81■□□□□ 0.92
SMPD2O60906 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMPD2O60906 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMPD2O60906 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD2O60906 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMPD2O60906 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD2O60906 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.8■□□□□ 0.92
SMPD2O60906 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD2O60906 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD2O60906 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMPD2O60906 AC010501.1-201ENST00000606270 1962 ntBASIC20.79■□□□□ 0.92
SMPD2O60906 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD2O60906 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms