Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFA4O00483 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFA4O00483 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFA4O00483 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDUFA4O00483 AC020928.2-201ENST00000588717 2197 ntBASIC18.33■□□□□ 0.52
NDUFA4O00483 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA4O00483 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA4O00483 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
NDUFA4O00483 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.33■□□□□ 0.52
NDUFA4O00483 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDUFA4O00483 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA4O00483 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDUFA4O00483 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA4O00483 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.32■□□□□ 0.52
NDUFA4O00483 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.32■□□□□ 0.52
NDUFA4O00483 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA4O00483 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.32■□□□□ 0.52
NDUFA4O00483 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDUFA4O00483 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA4O00483 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.31■□□□□ 0.52
NDUFA4O00483 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA4O00483 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
NDUFA4O00483 AL592293.1-201ENST00000502889 1188 ntBASIC18.31■□□□□ 0.52
NDUFA4O00483 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.31■□□□□ 0.52
NDUFA4O00483 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NDUFA4O00483 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.31■□□□□ 0.52
NDUFA4O00483 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.3■□□□□ 0.52
NDUFA4O00483 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA4O00483 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NDUFA4O00483 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 ABHD17AP5-201ENST00000580133 923 ntBASIC18.29■□□□□ 0.52
NDUFA4O00483 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.29■□□□□ 0.52
NDUFA4O00483 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NDUFA4O00483 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NDUFA4O00483 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA4O00483 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDUFA4O00483 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NDUFA4O00483 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NDUFA4O00483 AC018755.3-202ENST00000596210 929 ntBASIC18.28■□□□□ 0.52
NDUFA4O00483 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NDUFA4O00483 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFA4O00483 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.28■□□□□ 0.52
NDUFA4O00483 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDUFA4O00483 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA4O00483 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA4O00483 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA4O00483 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDUFA4O00483 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NDUFA4O00483 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NDUFA4O00483 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 U85056.1-201ENST00000616429 682 ntBASIC18.26■□□□□ 0.51
NDUFA4O00483 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.26■□□□□ 0.51
NDUFA4O00483 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDUFA4O00483 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NDUFA4O00483 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA4O00483 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NDUFA4O00483 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.25■□□□□ 0.51
NDUFA4O00483 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.25■□□□□ 0.51
NDUFA4O00483 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA4O00483 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA4O00483 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFA4O00483 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NDUFA4O00483 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFA4O00483 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDUFA4O00483 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFA4O00483 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFA4O00483 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDUFA4O00483 MIR6765-201ENST00000614092 87 ntBASIC18.23■□□□□ 0.51
NDUFA4O00483 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFA4O00483 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.22■□□□□ 0.51
NDUFA4O00483 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFA4O00483 AC142381.3-201ENST00000568208 1670 ntBASIC18.22■□□□□ 0.51
NDUFA4O00483 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.21■□□□□ 0.51
NDUFA4O00483 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.21■□□□□ 0.51
NDUFA4O00483 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.21■□□□□ 0.51
NDUFA4O00483 NTF6A-201ENST00000591175 560 ntBASIC18.21■□□□□ 0.51
NDUFA4O00483 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NDUFA4O00483 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFA4O00483 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms