Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.79■■□□□ 1.24
RTCAO00442 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCAO00442 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCAO00442 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
RTCAO00442 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.78■■□□□ 1.24
RTCAO00442 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
RTCAO00442 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.77■■□□□ 1.24
RTCAO00442 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
RTCAO00442 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTCAO00442 ABHD17AP5-201ENST00000580133 923 ntBASIC22.77■■□□□ 1.24
RTCAO00442 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCAO00442 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.76■■□□□ 1.23
RTCAO00442 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTCAO00442 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTCAO00442 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.76■■□□□ 1.23
RTCAO00442 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.75■■□□□ 1.23
RTCAO00442 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 SPCS2P3-201ENST00000500401 656 ntBASIC22.75■■□□□ 1.23
RTCAO00442 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTCAO00442 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.75■■□□□ 1.23
RTCAO00442 AC097639.1-201ENST00000565519 1891 ntBASIC22.75■■□□□ 1.23
RTCAO00442 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
RTCAO00442 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.74■■□□□ 1.23
RTCAO00442 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RTCAO00442 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTCAO00442 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.73■■□□□ 1.23
RTCAO00442 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RTCAO00442 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
RTCAO00442 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCAO00442 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RTCAO00442 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RTCAO00442 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.72■■□□□ 1.23
RTCAO00442 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RTCAO00442 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.72■■□□□ 1.23
RTCAO00442 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTCAO00442 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.72■■□□□ 1.23
RTCAO00442 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTCAO00442 KRT18P60-201ENST00000312876 1297 ntBASIC22.71■■□□□ 1.23
RTCAO00442 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.71■■□□□ 1.23
RTCAO00442 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RTCAO00442 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.71■■□□□ 1.23
RTCAO00442 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RTCAO00442 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.71■■□□□ 1.23
RTCAO00442 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
RTCAO00442 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTCAO00442 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTCAO00442 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RTCAO00442 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTCAO00442 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCAO00442 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTCAO00442 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTCAO00442 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RTCAO00442 DUX4L9-201ENST00000449051 1259 ntBASIC22.68■■□□□ 1.22
RTCAO00442 NTF6A-201ENST00000591175 560 ntBASIC22.68■■□□□ 1.22
RTCAO00442 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.68■■□□□ 1.22
RTCAO00442 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
RTCAO00442 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RTCAO00442 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
RTCAO00442 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.67■■□□□ 1.22
RTCAO00442 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCAO00442 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTCAO00442 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RTCAO00442 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.67■■□□□ 1.22
RTCAO00442 AC129492.7-201ENST00000622992 756 ntBASIC22.67■■□□□ 1.22
RTCAO00442 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.67■■□□□ 1.22
RTCAO00442 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTCAO00442 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RTCAO00442 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RTCAO00442 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCAO00442 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
RTCAO00442 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RTCAO00442 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCAO00442 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTCAO00442 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.65■■□□□ 1.22
RTCAO00442 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCAO00442 AC018755.3-202ENST00000596210 929 ntBASIC22.65■■□□□ 1.22
RTCAO00442 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCAO00442 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTCAO00442 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTCAO00442 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTCAO00442 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTCAO00442 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RTCAO00442 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTCAO00442 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTCAO00442 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
RTCAO00442 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms