Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IGKV3D-20A0A0C4DH25 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 HLA-V-202ENST00000446817 847 ntBASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.64■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DUX4L11-201ENST00000611504 1267 ntBASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DUX4L12-201ENST00000614593 1267 ntBASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DUX4L14-201ENST00000621227 1267 ntBASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 LINC01124-201ENST00000409786 2117 ntBASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 AP003733.4-201ENST00000623785 1697 ntBASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 AC097639.1-201ENST00000565519 1891 ntBASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 SLC6A10P-202ENST00000431994 2058 ntBASIC17.6■□□□□ 0.41
IGKV3D-20A0A0C4DH25 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV3D-20A0A0C4DH25 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
IGKV3D-20A0A0C4DH25 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV3D-20A0A0C4DH25 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IGKV3D-20A0A0C4DH25 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
IGKV3D-20A0A0C4DH25 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV3D-20A0A0C4DH25 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV3D-20A0A0C4DH25 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGKV3D-20A0A0C4DH25 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms