Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 AL355994.2-201ENST00000447882 704 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 CTBP2P5-201ENST00000454986 1264 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 USP32P1-208ENST00000506594 1164 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 AC010319.3-201ENST00000597028 470 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 MIR8072-201ENST00000614241 80 ntBASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 AC018665.1-201ENST00000622927 1362 ntBASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCH2Q9Y6C5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 PDIA3P1-201ENST00000471856 1510 ntBASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 TUBB1P2-201ENST00000422712 1306 ntBASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 TUBB1P1-201ENST00000503144 1300 ntBASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCH2Q9Y6C5 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.64■□□□□ 0.58
PTCH2Q9Y6C5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCH2Q9Y6C5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 CDC14C-201ENST00000428251 1719 ntBASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCH2Q9Y6C5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms