Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AC107890.1-201ENST00000422478 521 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 GPS2P2-201ENST00000430745 888 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 BCRP1-201ENST00000444246 691 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 ALG1L8P-201ENST00000533887 760 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AP000842.3-202ENST00000569238 1080 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 AC068880.1-201ENST00000507289 2297 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CTDP1Q9Y5B0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 BASP1P1-201ENST00000430708 665 ntBASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 INGX-202ENST00000489074 768 ntBASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 AC067852.2-201ENST00000590513 2313 ntBASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTDP1Q9Y5B0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTDP1Q9Y5B0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms