Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 ZNF890P-202ENST00000530367 1156 ntBASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 AC026979.3-201ENST00000607315 403 ntBASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNPO2Q9UMS6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AL512638.1-201ENST00000457493 794 ntBASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 AL365330.1-201ENST00000607459 531 ntBASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNPO2Q9UMS6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 AC087499.5-201ENST00000452760 1342 ntBASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 POU5F1P6-201ENST00000466990 990 ntBASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 TEX28P1-201ENST00000613479 1221 ntBASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 TEX28P2-201ENST00000617764 1221 ntBASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 AC078925.2-201ENST00000624013 1973 ntBASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPO2Q9UMS6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 HLA-A-202ENST00000376806 1854 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 U82695.1-201ENST00000635752 1889 ntBASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPO2Q9UMS6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms