Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 AC004449.1-201ENST00000564240 433 ntBASIC16.66■□□□□ 0.26
SPASTQ9UBP0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.66■□□□□ 0.26
SPASTQ9UBP0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
SPASTQ9UBP0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 AL671277.1-201ENST00000429656 993 ntBASIC16.65■□□□□ 0.26
SPASTQ9UBP0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 AC022145.2-201ENST00000598203 171 ntBASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.65■□□□□ 0.26
SPASTQ9UBP0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.64■□□□□ 0.26
SPASTQ9UBP0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SPASTQ9UBP0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
SPASTQ9UBP0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 AC022211.2-201ENST00000585075 2527 ntBASIC16.64■□□□□ 0.25
SPASTQ9UBP0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.64■□□□□ 0.25
SPASTQ9UBP0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 AC026120.1-201ENST00000611536 926 ntBASIC16.64■□□□□ 0.25
SPASTQ9UBP0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPASTQ9UBP0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms