Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 MPDU1-223ENST00000582151 728 ntBASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AL590326.2-201ENST00000625139 305 ntBASIC15.83■□□□□ 0.12
VAPAQ9P0L0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AC002310.6-201ENST00000624451 1377 ntBASIC15.83■□□□□ 0.12
VAPAQ9P0L0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPAQ9P0L0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 AC132008.2-207ENST00000454517 770 ntBASIC15.82■□□□□ 0.12
VAPAQ9P0L0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 AC087388.1-201ENST00000571370 1112 ntBASIC15.82■□□□□ 0.12
VAPAQ9P0L0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 AL022326.1-202ENST00000641533 845 ntBASIC15.82■□□□□ 0.12
VAPAQ9P0L0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 KRT8P39-201ENST00000396270 1433 ntBASIC15.82■□□□□ 0.12
VAPAQ9P0L0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPAQ9P0L0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 NKAPP1-205ENST00000585790 367 ntBASIC15.81■□□□□ 0.12
VAPAQ9P0L0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.81■□□□□ 0.12
VAPAQ9P0L0 AL139424.1-201ENST00000607572 797 ntBASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPAQ9P0L0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms