Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AC074386.1-202ENST00000463561 864 ntBASIC17.59■□□□□ 0.41
LHX5Q9H2C1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.59■□□□□ 0.41
LHX5Q9H2C1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 PCGF3-213ENST00000620529 1899 ntBASIC17.58■□□□□ 0.41
LHX5Q9H2C1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
LHX5Q9H2C1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 RPSAP43-201ENST00000402237 625 ntBASIC17.58■□□□□ 0.4
LHX5Q9H2C1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 AC004832.2-201ENST00000426397 482 ntBASIC17.58■□□□□ 0.4
LHX5Q9H2C1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.58■□□□□ 0.4
LHX5Q9H2C1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.58■□□□□ 0.4
LHX5Q9H2C1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LHX5Q9H2C1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AC092183.1-201ENST00000469884 875 ntBASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AL513190.1-201ENST00000621254 727 ntBASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AC055717.3-201ENST00000622967 595 ntBASIC17.57■□□□□ 0.4
LHX5Q9H2C1 AC092865.6-201ENST00000642101 219 ntBASIC17.57■□□□□ 0.4
LHX5Q9H2C1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX5Q9H2C1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms