Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 PMS2P7-201ENST00000506558 1336 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 PCDHA14-201ENST00000506751 2298 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AL031731.1-201ENST00000642131 2094 ntBASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AC023274.1-201ENST00000418278 595 ntBASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AC109635.5-201ENST00000533593 962 ntBASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AC002347.1-201ENST00000569543 541 ntBASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR1EQ9GZS1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 AL009183.1-201ENST00000603760 355 ntBASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
POLR1EQ9GZS1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms