Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 INTS4P1-201ENST00000438455 1935 ntBASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AC006277.1-201ENST00000624348 1610 ntBASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 RPL13AP23-201ENST00000480739 586 ntBASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AC139530.3-201ENST00000620344 690 ntBASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXP3Q9BZS1 AC002310.6-201ENST00000624451 1377 ntBASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SCARNA2-201ENST00000458748 420 ntBASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 AC106730.1-201ENST00000566722 1090 ntBASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXP3Q9BZS1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 AC092865.5-201ENST00000545435 363 ntBASIC17.27■□□□□ 0.36
FOXP3Q9BZS1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms