Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPAS2Q99743 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 AC079776.4-201ENST00000511039 504 ntBASIC16.42■□□□□ 0.22
NPAS2Q99743 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS2Q99743 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.42■□□□□ 0.22
NPAS2Q99743 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS2Q99743 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 AL365203.3-201ENST00000609742 2057 ntBASIC16.42■□□□□ 0.22
NPAS2Q99743 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPAS2Q99743 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS2Q99743 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS2Q99743 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS2Q99743 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NPAS2Q99743 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.41■□□□□ 0.22
NPAS2Q99743 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS2Q99743 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS2Q99743 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS2Q99743 KRT18P67-201ENST00000432816 1264 ntBASIC16.41■□□□□ 0.22
NPAS2Q99743 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS2Q99743 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 AC018712.1-201ENST00000455767 687 ntBASIC16.41■□□□□ 0.22
NPAS2Q99743 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.41■□□□□ 0.22
NPAS2Q99743 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS2Q99743 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS2Q99743 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
NPAS2Q99743 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS2Q99743 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS2Q99743 GPR89P-201ENST00000407924 1495 ntBASIC16.41■□□□□ 0.22
NPAS2Q99743 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS2Q99743 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS2Q99743 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS2Q99743 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS2Q99743 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NPAS2Q99743 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS2Q99743 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS2Q99743 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms