Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MTRQ99707 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 MCCD1P2-201ENST00000423228 335 ntBASIC18.81■□□□□ 0.6
MTRQ99707 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.81■□□□□ 0.6
MTRQ99707 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.81■□□□□ 0.6
MTRQ99707 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.81■□□□□ 0.6
MTRQ99707 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MTRQ99707 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.81■□□□□ 0.6
MTRQ99707 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.8■□□□□ 0.6
MTRQ99707 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MTRQ99707 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 GPX1P2-201ENST00000429271 606 ntBASIC18.8■□□□□ 0.6
MTRQ99707 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.8■□□□□ 0.6
MTRQ99707 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MTRQ99707 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MTRQ99707 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MTRQ99707 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.79■□□□□ 0.6
MTRQ99707 DOC2GP-204ENST00000639052 2548 ntBASIC18.79■□□□□ 0.6
MTRQ99707 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MTRQ99707 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MTRQ99707 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MTRQ99707 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.79■□□□□ 0.6
MTRQ99707 MIR1233-2-201ENST00000408138 82 ntBASIC18.79■□□□□ 0.6
MTRQ99707 MIR1233-1-201ENST00000408722 82 ntBASIC18.79■□□□□ 0.6
MTRQ99707 UPF3AP3-201ENST00000420996 769 ntBASIC18.79■□□□□ 0.6
MTRQ99707 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MTRQ99707 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MTRQ99707 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.79■□□□□ 0.6
MTRQ99707 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.79■□□□□ 0.6
MTRQ99707 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
MTRQ99707 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.79■□□□□ 0.6
MTRQ99707 MIR3687-2-201ENST00000577708 61 ntBASIC18.79■□□□□ 0.6
MTRQ99707 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
MTRQ99707 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 MIR3687-1-201ENST00000614492 61 ntBASIC18.79■□□□□ 0.6
MTRQ99707 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MTRQ99707 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
MTRQ99707 ME2P1-201ENST00000426028 1970 ntBASIC18.79■□□□□ 0.6
MTRQ99707 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MTRQ99707 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms