Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP2Q96SN8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP2Q96SN8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 AZGP1P1-201ENST00000411909 902 ntBASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 AL136982.4-201ENST00000437689 1740 ntBASIC19.39■□□□□ 0.69
CDK5RAP2Q96SN8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 RN7SL692P-201ENST00000464677 288 ntBASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 AC025048.6-201ENST00000634326 1161 ntBASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 AL035456.1-201ENST00000456064 1369 ntBASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP2Q96SN8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 AC009118.2-201ENST00000613275 655 ntBASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 HLA-V-204ENST00000476601 1289 ntBASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 IGHV3-72-202ENST00000621503 303 ntBASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.37■□□□□ 0.69
CDK5RAP2Q96SN8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.36■□□□□ 0.69
CDK5RAP2Q96SN8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms