Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FZD10-202ENST00000539839 3282 ntBASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AC124947.2-201ENST00000547118 1133 ntBASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AC073592.8-201ENST00000624126 511 ntBASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 AC100757.3-201ENST00000622361 1406 ntBASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC46A1Q96NT5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AC091167.2-201ENST00000579581 588 ntBASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AL359881.2-201ENST00000602973 570 ntBASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC46A1Q96NT5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 TOP3BP1-201ENST00000420768 1380 ntBASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 TSSK5P-201ENST00000423978 907 ntBASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 MEIS3P1-201ENST00000495167 958 ntBASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 AC018529.1-201ENST00000613063 361 ntBASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 SLC22A20-204ENST00000530038 1673 ntBASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC46A1Q96NT5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC46A1Q96NT5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms