Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
BRF1Q92994 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF1Q92994 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRF1Q92994 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRF1Q92994 AC104109.2-201ENST00000602919 1418 ntBASIC19.67■□□□□ 0.74
BRF1Q92994 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.67■□□□□ 0.74
BRF1Q92994 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BRF1Q92994 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
BRF1Q92994 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRF1Q92994 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.66■□□□□ 0.74
BRF1Q92994 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 AC012569.1-201ENST00000591191 1524 ntBASIC19.66■□□□□ 0.74
BRF1Q92994 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
BRF1Q92994 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 AC034105.1-201ENST00000563488 319 ntBASIC19.66■□□□□ 0.74
BRF1Q92994 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.66■□□□□ 0.74
BRF1Q92994 IL9RP2-201ENST00000423948 1312 ntBASIC19.66■□□□□ 0.74
BRF1Q92994 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.66■□□□□ 0.74
BRF1Q92994 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BRF1Q92994 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.66■□□□□ 0.74
BRF1Q92994 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.66■□□□□ 0.74
BRF1Q92994 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRF1Q92994 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BRF1Q92994 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRF1Q92994 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.65■□□□□ 0.74
BRF1Q92994 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 MIR4515-201ENST00000584082 81 ntBASIC19.65■□□□□ 0.74
BRF1Q92994 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 AC010507.1-201ENST00000633895 436 ntBASIC19.65■□□□□ 0.74
BRF1Q92994 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRF1Q92994 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRF1Q92994 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
BRF1Q92994 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRF1Q92994 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRF1Q92994 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
BRF1Q92994 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
BRF1Q92994 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.64■□□□□ 0.73
BRF1Q92994 AL513480.1-201ENST00000451731 511 ntBASIC19.64■□□□□ 0.73
BRF1Q92994 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.64■□□□□ 0.73
BRF1Q92994 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
BRF1Q92994 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.64■□□□□ 0.73
BRF1Q92994 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.64■□□□□ 0.73
BRF1Q92994 AC145285.3-201ENST00000564603 959 ntBASIC19.64■□□□□ 0.73
BRF1Q92994 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.64■□□□□ 0.73
BRF1Q92994 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.64■□□□□ 0.73
BRF1Q92994 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.64■□□□□ 0.73
BRF1Q92994 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
BRF1Q92994 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.64■□□□□ 0.73
BRF1Q92994 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.64■□□□□ 0.73
BRF1Q92994 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRF1Q92994 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF1Q92994 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF1Q92994 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms