Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L1Q8WWY6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.15□□□□□ -0.31
MBD3L1Q8WWY6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MBD3L1Q8WWY6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
MBD3L1Q8WWY6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 IGHGP-201ENST00000390555 1178 ntBASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 C2orf69P3-201ENST00000565542 1120 ntBASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 AL136038.4-201ENST00000603606 1261 ntBASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L1Q8WWY6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 KRT8P49-201ENST00000604166 1432 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 TMBIM7P-203ENST00000641617 1718 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PRAL-201ENST00000624952 3286 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AL353593.2-201ENST00000602529 1483 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 UNC93B2-201ENST00000285383 730 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 TSPY14P-201ENST00000303979 915 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 FITM1-202ENST00000559294 800 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AP001412.1-201ENST00000608405 714 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AC092666.2-201ENST00000613287 246 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 AC073912.3-201ENST00000624414 853 ntBASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L1Q8WWY6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms