Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 PCDH8P1-201ENST00000428983 2773 ntBASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 PCDHA14-201ENST00000506751 2298 ntBASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-3Q8TAU0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AL627223.1-201ENST00000416693 442 ntBASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 CR383656.12-201ENST00000549567 513 ntBASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AL138918.1-201ENST00000568306 659 ntBASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 MIR6752-201ENST00000618442 71 ntBASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NKX2-3Q8TAU0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 AC016027.1-202ENST00000607927 1699 ntBASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 OR8S1-201ENST00000310194 1080 ntBASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 AL355306.1-201ENST00000415580 579 ntBASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 AC243562.1-201ENST00000560672 389 ntBASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 AC027307.3-201ENST00000594262 1100 ntBASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-3Q8TAU0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms