Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL22A1Q8NFW1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
COL22A1Q8NFW1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
COL22A1Q8NFW1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL22A1Q8NFW1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL22A1Q8NFW1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 AC007969.1-201ENST00000433675 447 ntBASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 ACTG1P17-201ENST00000558391 1119 ntBASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL22A1Q8NFW1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 AC091804.1-201ENST00000486888 567 ntBASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 AC005695.3-201ENST00000614522 232 ntBASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL22A1Q8NFW1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 MIR6727-201ENST00000620702 65 ntBASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 AL138688.1-201ENST00000624851 1594 ntBASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL22A1Q8NFW1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 FAM86LP-201ENST00000478302 853 ntBASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AC120045.2-201ENST00000567334 178 ntBASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms