Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 ALOX12P2-203ENST00000570921 1945 ntBASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AL031432.2-201ENST00000566714 459 ntBASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AL928711.1-201ENST00000570165 459 ntBASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC010507.1-201ENST00000633895 436 ntBASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC079328.2-201ENST00000561241 3354 ntBASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM35BQ8NCS4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 HMGA1P7-201ENST00000406908 502 ntBASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RHOQP3-201ENST00000437982 621 ntBASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 BX640515.1-201ENST00000617215 977 ntBASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 GGT4P-201ENST00000623672 1708 ntBASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 ME2P1-201ENST00000426028 1970 ntBASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM35BQ8NCS4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM35BQ8NCS4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms