Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 ALG1L5P-201ENST00000482043 771 ntBASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AC112482.1-201ENST00000492080 688 ntBASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AL078644.1-201ENST00000609881 752 ntBASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZIC4Q8N9L1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 BX842568.4-201ENST00000421222 227 ntBASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 HTR5BP-201ENST00000430851 1154 ntBASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 AL161645.1-201ENST00000622716 1255 ntBASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC4Q8N9L1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC4Q8N9L1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms