Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00311Q8N616 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00311Q8N616 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00311Q8N616 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 RNA5SP416-201ENST00000516838 111 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 KRT19P2-202ENST00000557173 1012 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 AL009183.1-201ENST00000603760 355 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 AC120114.3-201ENST00000611923 658 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 FAM197Y3-203ENST00000618346 717 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 AC004877.2-201ENST00000623941 599 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 BCAR1-209ENST00000546196 1340 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 MTHFR-217ENST00000641820 1569 ntBASIC13.52□□□□□ -0.25
LINC00311Q8N616 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00311Q8N616 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00311Q8N616 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 AC006449.5-201ENST00000610658 2098 ntBASIC13.51□□□□□ -0.25
LINC00311Q8N616 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 AC025580.3-201ENST00000617932 1424 ntBASIC13.51□□□□□ -0.25
LINC00311Q8N616 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 KRT18P2-201ENST00000447938 1258 ntBASIC13.51□□□□□ -0.25
LINC00311Q8N616 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 PCDHB19P-201ENST00000570871 2371 ntBASIC13.51□□□□□ -0.25
LINC00311Q8N616 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00311Q8N616 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00311Q8N616 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00311Q8N616 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00311Q8N616 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms