Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
CCDC116Q8IYX3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 SNX33P1-201ENST00000592116 1762 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 AC009947.1-201ENST00000444350 727 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 HLA-J-202ENST00000469281 1241 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 IGHV3-22-201ENST00000520721 359 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 AC005412.3-201ENST00000580309 715 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC116Q8IYX3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 CRYGEP-201ENST00000412192 528 ntBASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 PRSS29P-201ENST00000440800 595 ntBASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC116Q8IYX3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC116Q8IYX3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 PCDH8P1-201ENST00000428983 2773 ntBASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC116Q8IYX3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms