Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS3Q8IXF0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS3Q8IXF0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.21■□□□□ 0.34
NPAS3Q8IXF0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.21■□□□□ 0.34
NPAS3Q8IXF0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPAS3Q8IXF0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
NPAS3Q8IXF0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.21■□□□□ 0.34
NPAS3Q8IXF0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 MTND6P24-201ENST00000440466 518 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC009407.1-201ENST00000568958 598 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AL844908.2-201ENST00000609461 460 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC008738.7-201ENST00000609744 511 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LINC02012-201ENST00000608206 1725 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 AC087499.5-201ENST00000452760 1342 ntBASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS3Q8IXF0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CETN4P-206ENST00000642099 2168 ntBASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AL671710.1-201ENST00000610245 2349 ntBASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 LTB4R2-202ENST00000528054 3092 ntBASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC124947.2-201ENST00000547118 1133 ntBASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 AL589739.1-201ENST00000607720 493 ntBASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS3Q8IXF0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms