Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DNAJB3-202ENST00000449667 1266 ntBASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 AC124947.2-201ENST00000547118 1133 ntBASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 KRT8P49-201ENST00000604166 1432 ntBASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AC087641.1-201ENST00000557561 1021 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AP002472.1-201ENST00000577490 586 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AP001160.2-201ENST00000596071 487 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 TUBB7P-202ENST00000428444 1305 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM48Q8IWZ4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 AC140658.5-201ENST00000438532 169 ntBASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 AP006288.1-201ENST00000446065 395 ntBASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms