Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 RPL37AP1-201ENST00000412502 279 ntBASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.01■□□□□ 0.47
HERC6Q8IVU3 INE1-201ENST00000456273 945 ntBASIC18.01■□□□□ 0.47
HERC6Q8IVU3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AC017083.2-201ENST00000608069 979 ntBASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AC004840.1-201ENST00000636359 365 ntBASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HERC6Q8IVU3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 FOXO1B-201ENST00000504678 1527 ntBASIC18■□□□□ 0.47
HERC6Q8IVU3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 DGCR5-201ENST00000399539 862 ntBASIC18■□□□□ 0.47
HERC6Q8IVU3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
HERC6Q8IVU3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18■□□□□ 0.47
HERC6Q8IVU3 MTND6P24-201ENST00000440466 518 ntBASIC18■□□□□ 0.47
HERC6Q8IVU3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18■□□□□ 0.47
HERC6Q8IVU3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HERC6Q8IVU3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18■□□□□ 0.47
HERC6Q8IVU3 AL589739.1-201ENST00000607720 493 ntBASIC18■□□□□ 0.47
HERC6Q8IVU3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18■□□□□ 0.47
HERC6Q8IVU3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18■□□□□ 0.47
HERC6Q8IVU3 LINC00895-201ENST00000629028 1637 ntBASIC18■□□□□ 0.47
HERC6Q8IVU3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18■□□□□ 0.47
HERC6Q8IVU3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC6Q8IVU3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HERC6Q8IVU3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.99■□□□□ 0.47
HERC6Q8IVU3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 AC139713.2-201ENST00000641328 2723 ntBASIC17.99■□□□□ 0.47
HERC6Q8IVU3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HERC6Q8IVU3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms