Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 CNN2P11-201ENST00000429351 262 ntBASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 HLA-J-202ENST00000469281 1241 ntBASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM4Q86VH4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 KRT18P34-201ENST00000488218 1270 ntBASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 KRT8P48-201ENST00000515599 1220 ntBASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AC022145.2-201ENST00000598203 171 ntBASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM4Q86VH4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 AC006538.1-201ENST00000567905 1585 ntBASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM4Q86VH4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms