Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
VPS13BQ7Z7G8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC012313.1-201ENST00000593393 3059 ntBASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC093726.1-201ENST00000608064 963 ntBASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
VPS13BQ7Z7G8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 AC061975.2-201ENST00000581722 295 ntBASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
VPS13BQ7Z7G8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 KRT8P49-201ENST00000604166 1432 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 AC006538.1-201ENST00000567905 1585 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 FZD10-202ENST00000539839 3282 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 RPL7P3-201ENST00000441388 714 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 AC244093.1-201ENST00000610837 814 ntBASIC10.14□□□□□ -0.79
VPS13BQ7Z7G8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms