Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AC024909.3-201ENST00000611513 2257 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AC078925.2-201ENST00000624013 1973 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TSSC2-201ENST00000450217 709 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 KRT8P26-201ENST00000534154 1276 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 MIR3652-201ENST00000579335 131 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 CLEC4GP1-201ENST00000596555 870 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AL136038.4-201ENST00000603606 1261 ntBASIC14.66□□□□□ -0.06
C11orf88Q6PI97 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
C11orf88Q6PI97 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 HLA-F-220ENST00000434407 884 ntBASIC14.65□□□□□ -0.06
C11orf88Q6PI97 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AC092329.2-201ENST00000598402 547 ntBASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 BX276092.7-203ENST00000637198 1536 ntBASIC14.65□□□□□ -0.06
C11orf88Q6PI97 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
C11orf88Q6PI97 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms