Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 AC092865.5-201ENST00000545435 363 ntBASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.42■□□□□ 0.38
TTC39BQ5VTQ0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 AC025580.3-201ENST00000617932 1424 ntBASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 AC092068.3-201ENST00000587894 2016 ntBASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC39BQ5VTQ0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AC074386.1-202ENST00000463561 864 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AL031432.2-201ENST00000566714 459 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AL928711.1-201ENST00000570165 459 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MIR3687-2-201ENST00000577708 61 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MIR4515-201ENST00000584082 81 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 MIR3687-1-201ENST00000614492 61 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AL513190.1-201ENST00000621254 727 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 AC092865.6-201ENST00000642101 219 ntBASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC39BQ5VTQ0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms