Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 KRT8P23-201ENST00000560090 1207 ntBASIC20.44■□□□□ 0.86
ATP2B3Q16720 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2B3Q16720 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATP2B3Q16720 KRT8P39-201ENST00000396270 1433 ntBASIC20.44■□□□□ 0.86
ATP2B3Q16720 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 UXT-AS1-201ENST00000590504 1525 ntBASIC20.43■□□□□ 0.86
ATP2B3Q16720 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 AP002490.2-201ENST00000524791 560 ntBASIC20.43■□□□□ 0.86
ATP2B3Q16720 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 AC027307.2-201ENST00000591252 911 ntBASIC20.43■□□□□ 0.86
ATP2B3Q16720 AL355385.1-201ENST00000606123 409 ntBASIC20.43■□□□□ 0.86
ATP2B3Q16720 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATP2B3Q16720 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2B3Q16720 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 GPS2P2-201ENST00000430745 888 ntBASIC20.42■□□□□ 0.86
ATP2B3Q16720 CYMP-203ENST00000474680 1263 ntBASIC20.42■□□□□ 0.86
ATP2B3Q16720 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 AL138918.1-201ENST00000568306 659 ntBASIC20.42■□□□□ 0.86
ATP2B3Q16720 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 AC106028.4-201ENST00000614509 607 ntBASIC20.42■□□□□ 0.86
ATP2B3Q16720 AC008267.7-201ENST00000624570 1194 ntBASIC20.42■□□□□ 0.86
ATP2B3Q16720 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2B3Q16720 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms