Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHBDL3P58872 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHBDL3P58872 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHBDL3P58872 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHBDL3P58872 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHBDL3P58872 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.58■□□□□ 0.73
RHBDL3P58872 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.58■□□□□ 0.72
RHBDL3P58872 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.58■□□□□ 0.72
RHBDL3P58872 MTND6P24-201ENST00000440466 518 ntBASIC19.58■□□□□ 0.72
RHBDL3P58872 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RHBDL3P58872 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.58■□□□□ 0.72
RHBDL3P58872 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.58■□□□□ 0.72
RHBDL3P58872 AC061975.2-201ENST00000581722 295 ntBASIC19.58■□□□□ 0.72
RHBDL3P58872 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.58■□□□□ 0.72
RHBDL3P58872 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.58■□□□□ 0.72
RHBDL3P58872 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RHBDL3P58872 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RHBDL3P58872 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RHBDL3P58872 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.58■□□□□ 0.72
RHBDL3P58872 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.57■□□□□ 0.72
RHBDL3P58872 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 AL080243.2-201ENST00000418783 582 ntBASIC19.57■□□□□ 0.72
RHBDL3P58872 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 HLA-J-202ENST00000469281 1241 ntBASIC19.57■□□□□ 0.72
RHBDL3P58872 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 AL589739.1-201ENST00000607720 493 ntBASIC19.57■□□□□ 0.72
RHBDL3P58872 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.57■□□□□ 0.72
RHBDL3P58872 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.57■□□□□ 0.72
RHBDL3P58872 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RHBDL3P58872 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.57■□□□□ 0.72
RHBDL3P58872 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 CETN4P-206ENST00000642099 2168 ntBASIC19.57■□□□□ 0.72
RHBDL3P58872 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 AC106820.2-201ENST00000563775 3264 ntBASIC19.57■□□□□ 0.72
RHBDL3P58872 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
RHBDL3P58872 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RHBDL3P58872 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.57■□□□□ 0.72
RHBDL3P58872 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.56■□□□□ 0.72
RHBDL3P58872 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RHBDL3P58872 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 AC087499.5-201ENST00000452760 1342 ntBASIC19.56■□□□□ 0.72
RHBDL3P58872 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.56■□□□□ 0.72
RHBDL3P58872 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RHBDL3P58872 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.56■□□□□ 0.72
RHBDL3P58872 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.56■□□□□ 0.72
RHBDL3P58872 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 AL079307.3-201ENST00000556114 283 ntBASIC19.56■□□□□ 0.72
RHBDL3P58872 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
RHBDL3P58872 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.56■□□□□ 0.72
RHBDL3P58872 RNF216P1-203ENST00000404404 2427 ntBASIC19.56■□□□□ 0.72
RHBDL3P58872 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.56■□□□□ 0.72
RHBDL3P58872 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RHBDL3P58872 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RHBDL3P58872 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDL3P58872 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RHBDL3P58872 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RHBDL3P58872 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RHBDL3P58872 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.55■□□□□ 0.72
RHBDL3P58872 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms