Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.96□□□□□ -0.01
CLRN1P58418 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
CLRN1P58418 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.96□□□□□ -0.01
CLRN1P58418 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.96□□□□□ -0.01
CLRN1P58418 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.96□□□□□ -0.01
CLRN1P58418 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.96□□□□□ -0.01
CLRN1P58418 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 AC104692.2-201ENST00000603054 253 ntBASIC14.96□□□□□ -0.01
CLRN1P58418 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.96□□□□□ -0.01
CLRN1P58418 AP001350.2-201ENST00000625104 1094 ntBASIC14.96□□□□□ -0.01
CLRN1P58418 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLRN1P58418 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.96□□□□□ -0.01
CLRN1P58418 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.96□□□□□ -0.01
CLRN1P58418 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLRN1P58418 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLRN1P58418 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
CLRN1P58418 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLRN1P58418 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLRN1P58418 AL353732.1-201ENST00000569618 1459 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 AC131009.4-201ENST00000624048 1740 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 AC006538.1-201ENST00000567905 1585 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.95□□□□□ -0.02
CLRN1P58418 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CLRN1P58418 AC108073.2-201ENST00000464002 357 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.95□□□□□ -0.02
CLRN1P58418 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 AL662844.1-201ENST00000546340 181 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 AP001005.1-201ENST00000571755 1248 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 MIR4751-201ENST00000578027 74 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 AC005412.3-201ENST00000580309 715 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.95□□□□□ -0.02
CLRN1P58418 AC117500.6-201ENST00000624871 588 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 AL139011.1-202ENST00000642063 584 ntBASIC14.95□□□□□ -0.02
CLRN1P58418 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLRN1P58418 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLRN1P58418 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLRN1P58418 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLRN1P58418 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms