Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK2P53671 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LIMK2P53671 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.87■□□□□ 0.29
LIMK2P53671 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK2P53671 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 ME2P1-201ENST00000426028 1970 ntBASIC16.87■□□□□ 0.29
LIMK2P53671 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LIMK2P53671 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK2P53671 NCF1C-201ENST00000438382 1427 ntBASIC16.87■□□□□ 0.29
LIMK2P53671 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK2P53671 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.86■□□□□ 0.29
LIMK2P53671 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LIMK2P53671 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LIMK2P53671 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.86■□□□□ 0.29
LIMK2P53671 AC007967.2-201ENST00000432613 625 ntBASIC16.86■□□□□ 0.29
LIMK2P53671 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.86■□□□□ 0.29
LIMK2P53671 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LIMK2P53671 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.86■□□□□ 0.29
LIMK2P53671 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.86■□□□□ 0.29
LIMK2P53671 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.86■□□□□ 0.29
LIMK2P53671 AC004706.3-202ENST00000621574 984 ntBASIC16.86■□□□□ 0.29
LIMK2P53671 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LIMK2P53671 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 LINC02199-201ENST00000506655 2702 ntBASIC16.86■□□□□ 0.29
LIMK2P53671 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LIMK2P53671 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK2P53671 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.85■□□□□ 0.29
LIMK2P53671 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 UPF3AP3-201ENST00000420996 769 ntBASIC16.85■□□□□ 0.29
LIMK2P53671 AC108751.1-201ENST00000490852 363 ntBASIC16.85■□□□□ 0.29
LIMK2P53671 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.85■□□□□ 0.29
LIMK2P53671 AL139424.1-201ENST00000607572 797 ntBASIC16.85■□□□□ 0.29
LIMK2P53671 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LIMK2P53671 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LIMK2P53671 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
LIMK2P53671 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LIMK2P53671 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LIMK2P53671 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK2P53671 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK2P53671 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LIMK2P53671 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms