Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC25A1P53007 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 AC087641.1-201ENST00000557561 1021 ntBASIC14.86□□□□□ -0.03
SLC25A1P53007 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC25A1P53007 GGTLC5P-201ENST00000617623 998 ntBASIC14.86□□□□□ -0.03
SLC25A1P53007 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC25A1P53007 PCGF3-213ENST00000620529 1899 ntBASIC14.86□□□□□ -0.03
SLC25A1P53007 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
SLC25A1P53007 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC25A1P53007 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC25A1P53007 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.85□□□□□ -0.03
SLC25A1P53007 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC25A1P53007 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC25A1P53007 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 HCG4-201ENST00000418983 998 ntBASIC14.85□□□□□ -0.03
SLC25A1P53007 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC25A1P53007 UPK3BP1-201ENST00000428678 509 ntBASIC14.85□□□□□ -0.03
SLC25A1P53007 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC25A1P53007 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC25A1P53007 AC021087.4-201ENST00000563761 564 ntBASIC14.85□□□□□ -0.03
SLC25A1P53007 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SLC25A1P53007 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 AC129492.6-201ENST00000611383 1305 ntBASIC14.85□□□□□ -0.03
SLC25A1P53007 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC25A1P53007 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC25A1P53007 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC25A1P53007 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC25A1P53007 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC25A1P53007 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms