Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.38■□□□□ 0.53
CPT1AP50416 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.38■□□□□ 0.53
CPT1AP50416 AL080243.2-201ENST00000418783 582 ntBASIC18.38■□□□□ 0.53
CPT1AP50416 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.38■□□□□ 0.53
CPT1AP50416 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 BTBD7P1-201ENST00000447253 1453 ntBASIC18.38■□□□□ 0.53
CPT1AP50416 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.38■□□□□ 0.53
CPT1AP50416 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPT1AP50416 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.38■□□□□ 0.53
CPT1AP50416 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPT1AP50416 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPT1AP50416 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.37■□□□□ 0.53
CPT1AP50416 AL353779.1-201ENST00000434793 351 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.37■□□□□ 0.53
CPT1AP50416 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.37■□□□□ 0.53
CPT1AP50416 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.37■□□□□ 0.53
CPT1AP50416 ZNF890P-202ENST00000530367 1156 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.37■□□□□ 0.53
CPT1AP50416 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.37■□□□□ 0.53
CPT1AP50416 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.37■□□□□ 0.53
CPT1AP50416 AC024267.1-201ENST00000582320 895 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 AL132655.2-201ENST00000596276 594 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 CU639417.3-201ENST00000624240 1404 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 AC007541.1-201ENST00000570282 1469 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
CPT1AP50416 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPT1AP50416 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.37■□□□□ 0.53
CPT1AP50416 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CPT1AP50416 PCDHB17P-201ENST00000539533 2393 ntBASIC18.37■□□□□ 0.53
CPT1AP50416 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CPT1AP50416 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CPT1AP50416 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CPT1AP50416 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 KRT17P7-201ENST00000451704 1104 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPT1AP50416 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.36■□□□□ 0.53
CPT1AP50416 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.36■□□□□ 0.53
CPT1AP50416 TP53TG3HP-202ENST00000569755 579 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.36■□□□□ 0.53
CPT1AP50416 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.36■□□□□ 0.53
CPT1AP50416 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.36■□□□□ 0.53
CPT1AP50416 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms