Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1DP48730 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1DP48730 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1DP48730 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CSNK1DP48730 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CSNK1DP48730 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1DP48730 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.7■□□□□ 0.26
CSNK1DP48730 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.7■□□□□ 0.26
CSNK1DP48730 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.7■□□□□ 0.26
CSNK1DP48730 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.7■□□□□ 0.26
CSNK1DP48730 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.7■□□□□ 0.26
CSNK1DP48730 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1DP48730 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.7■□□□□ 0.26
CSNK1DP48730 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1DP48730 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 PCGF3-213ENST00000620529 1899 ntBASIC16.69■□□□□ 0.26
CSNK1DP48730 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 FLJ38576-201ENST00000623820 2459 ntBASIC16.69■□□□□ 0.26
CSNK1DP48730 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.69■□□□□ 0.26
CSNK1DP48730 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.69■□□□□ 0.26
CSNK1DP48730 AC105233.2-201ENST00000523697 349 ntBASIC16.69■□□□□ 0.26
CSNK1DP48730 AF228730.5-201ENST00000530288 346 ntBASIC16.69■□□□□ 0.26
CSNK1DP48730 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.69■□□□□ 0.26
CSNK1DP48730 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 AL138918.1-201ENST00000568306 659 ntBASIC16.69■□□□□ 0.26
CSNK1DP48730 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.69■□□□□ 0.26
CSNK1DP48730 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.69■□□□□ 0.26
CSNK1DP48730 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.69■□□□□ 0.26
CSNK1DP48730 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.69■□□□□ 0.26
CSNK1DP48730 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1DP48730 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSNK1DP48730 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CSNK1DP48730 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CSNK1DP48730 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AL627223.1-201ENST00000416693 442 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 RPS8P6-201ENST00000426177 609 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AC069335.1-201ENST00000489972 472 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 PRYP6-201ENST00000514804 343 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 IGHV3-62-201ENST00000520057 340 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.68■□□□□ 0.26
CSNK1DP48730 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.68■□□□□ 0.26
CSNK1DP48730 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1DP48730 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AL596442.2-201ENST00000610240 980 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 AC073439.1-201ENST00000624121 1774 ntBASIC16.68■□□□□ 0.26
CSNK1DP48730 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1DP48730 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms