Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL353732.1-201ENST00000569618 1459 ntBASIC15.33■□□□□ 0.04
RFC3P40938 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC3P40938 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC3P40938 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.33■□□□□ 0.04
RFC3P40938 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFC3P40938 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RFC3P40938 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RFC3P40938 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC3P40938 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RFC3P40938 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RFC3P40938 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC3P40938 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC3P40938 AC005237.2-201ENST00000434368 219 ntBASIC15.32■□□□□ 0.04
RFC3P40938 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.32■□□□□ 0.04
RFC3P40938 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RFC3P40938 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC3P40938 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.32■□□□□ 0.04
RFC3P40938 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.32■□□□□ 0.04
RFC3P40938 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 AL121761.2-201ENST00000598007 1648 ntBASIC15.32■□□□□ 0.04
RFC3P40938 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFC3P40938 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 AL118508.1-201ENST00000613502 2345 ntBASIC15.31■□□□□ 0.04
RFC3P40938 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 TFAMP1-201ENST00000412727 736 ntBASIC15.31■□□□□ 0.04
RFC3P40938 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 AC109322.1-201ENST00000524499 1264 ntBASIC15.31■□□□□ 0.04
RFC3P40938 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.31■□□□□ 0.04
RFC3P40938 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.31■□□□□ 0.04
RFC3P40938 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.31■□□□□ 0.04
RFC3P40938 AC093520.2-201ENST00000561830 333 ntBASIC15.31■□□□□ 0.04
RFC3P40938 AL135744.1-201ENST00000565098 629 ntBASIC15.31■□□□□ 0.04
RFC3P40938 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.31■□□□□ 0.04
RFC3P40938 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 TOP3BP1-201ENST00000420768 1380 ntBASIC15.31■□□□□ 0.04
RFC3P40938 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.31■□□□□ 0.04
RFC3P40938 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 AD000864.1-201ENST00000624076 2295 ntBASIC15.31■□□□□ 0.04
RFC3P40938 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC3P40938 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFC3P40938 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC3P40938 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC3P40938 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC3P40938 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms