Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RORAP35398 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.87■□□□□ 0.13
RORAP35398 AC005237.2-201ENST00000434368 219 ntBASIC15.87■□□□□ 0.13
RORAP35398 SPCS2P4-201ENST00000436160 681 ntBASIC15.87■□□□□ 0.13
RORAP35398 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 AC069335.1-201ENST00000489972 472 ntBASIC15.87■□□□□ 0.13
RORAP35398 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
RORAP35398 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 AC025678.2-201ENST00000562061 970 ntBASIC15.87■□□□□ 0.13
RORAP35398 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.87■□□□□ 0.13
RORAP35398 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 AP001350.2-201ENST00000625104 1094 ntBASIC15.87■□□□□ 0.13
RORAP35398 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.87■□□□□ 0.13
RORAP35398 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.87■□□□□ 0.13
RORAP35398 AP001094.4-201ENST00000579008 2176 ntBASIC15.87■□□□□ 0.13
RORAP35398 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RORAP35398 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.87■□□□□ 0.13
RORAP35398 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.87■□□□□ 0.13
RORAP35398 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RORAP35398 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.86■□□□□ 0.13
RORAP35398 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RORAP35398 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.86■□□□□ 0.13
RORAP35398 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 PMS2P4-201ENST00000412466 1052 ntBASIC15.86■□□□□ 0.13
RORAP35398 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.86■□□□□ 0.13
RORAP35398 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.86■□□□□ 0.13
RORAP35398 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.86■□□□□ 0.13
RORAP35398 LINC01225-203ENST00000563550 1244 ntBASIC15.86■□□□□ 0.13
RORAP35398 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.86■□□□□ 0.13
RORAP35398 MIR4492-201ENST00000581627 80 ntBASIC15.86■□□□□ 0.13
RORAP35398 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RORAP35398 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.86■□□□□ 0.13
RORAP35398 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RORAP35398 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RORAP35398 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.86■□□□□ 0.13
RORAP35398 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 WASH6P-202ENST00000359512 1437 ntBASIC15.85■□□□□ 0.13
RORAP35398 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.85■□□□□ 0.13
RORAP35398 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.85■□□□□ 0.13
RORAP35398 FAM58DP-201ENST00000428076 619 ntBASIC15.85■□□□□ 0.13
RORAP35398 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.85■□□□□ 0.13
RORAP35398 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.85■□□□□ 0.13
RORAP35398 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 AC015911.4-201ENST00000588022 1070 ntBASIC15.85■□□□□ 0.13
RORAP35398 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.85■□□□□ 0.13
RORAP35398 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.85■□□□□ 0.13
RORAP35398 AC092053.1-201ENST00000605787 1936 ntBASIC15.85■□□□□ 0.13
RORAP35398 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 TUBB8P12-201ENST00000308911 1335 ntBASIC15.85■□□□□ 0.13
RORAP35398 TUBB7P-202ENST00000428444 1305 ntBASIC15.85■□□□□ 0.13
RORAP35398 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 TUBB8P7-204ENST00000567960 1332 ntBASIC15.85■□□□□ 0.13
RORAP35398 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RORAP35398 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms