Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PTPN7P35236 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN7P35236 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN7P35236 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
PTPN7P35236 AC006449.6-201ENST00000612330 2296 ntBASIC17.27■□□□□ 0.36
PTPN7P35236 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PTPN7P35236 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PTPN7P35236 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN7P35236 RNPS1P1-201ENST00000507437 918 ntBASIC17.27■□□□□ 0.36
PTPN7P35236 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN7P35236 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.27■□□□□ 0.36
PTPN7P35236 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN7P35236 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN7P35236 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN7P35236 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN7P35236 PGM5P2-202ENST00000637225 1043 ntBASIC17.27■□□□□ 0.36
PTPN7P35236 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PTPN7P35236 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN7P35236 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN7P35236 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN7P35236 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPN7P35236 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN7P35236 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN7P35236 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.26■□□□□ 0.35
PTPN7P35236 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 AL356488.2-201ENST00000602755 427 ntBASIC17.26■□□□□ 0.35
PTPN7P35236 AC020765.3-201ENST00000613051 740 ntBASIC17.26■□□□□ 0.35
PTPN7P35236 TP73-AS1-207ENST00000624167 988 ntBASIC17.26■□□□□ 0.35
PTPN7P35236 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN7P35236 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN7P35236 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN7P35236 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN7P35236 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 AC007950.2-201ENST00000615045 2347 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms