Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXA11P31270 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXA11P31270 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA11P31270 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.94■□□□□ 0.46
HOXA11P31270 AC003101.2-201ENST00000612557 442 ntBASIC17.94■□□□□ 0.46
HOXA11P31270 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HOXA11P31270 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA11P31270 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA11P31270 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HOXA11P31270 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
HOXA11P31270 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HOXA11P31270 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HOXA11P31270 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA11P31270 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA11P31270 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HOXA11P31270 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 UGT1A2P-201ENST00000454886 866 ntBASIC17.93■□□□□ 0.46
HOXA11P31270 INGX-202ENST00000489074 768 ntBASIC17.93■□□□□ 0.46
HOXA11P31270 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA11P31270 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.93■□□□□ 0.46
HOXA11P31270 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA11P31270 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA11P31270 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA11P31270 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA11P31270 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA11P31270 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA11P31270 MIR4745-201ENST00000577608 62 ntBASIC17.92■□□□□ 0.46
HOXA11P31270 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA11P31270 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 AL390754.1-201ENST00000619088 582 ntBASIC17.92■□□□□ 0.46
HOXA11P31270 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HOXA11P31270 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HOXA11P31270 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA11P31270 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA11P31270 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA11P31270 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA11P31270 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXA11P31270 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA11P31270 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXA11P31270 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA11P31270 MIR661-201ENST00000384842 89 ntBASIC17.91■□□□□ 0.46
HOXA11P31270 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA11P31270 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.91■□□□□ 0.46
HOXA11P31270 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA11P31270 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA11P31270 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HOXA11P31270 BANF1P1-201ENST00000553684 263 ntBASIC17.91■□□□□ 0.46
HOXA11P31270 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA11P31270 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HOXA11P31270 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HOXA11P31270 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXA11P31270 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA11P31270 AL589702.1-201ENST00000641229 1509 ntBASIC17.91■□□□□ 0.46
HOXA11P31270 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms