Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.5■□□□□ 0.87
TM4SF1P30408 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
TM4SF1P30408 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TM4SF1P30408 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.5■□□□□ 0.87
TM4SF1P30408 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 RRP7BP-205ENST00000566851 833 ntBASIC20.5■□□□□ 0.87
TM4SF1P30408 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 RPSAP52-203ENST00000622976 1023 ntBASIC20.5■□□□□ 0.87
TM4SF1P30408 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF1P30408 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.5■□□□□ 0.87
TM4SF1P30408 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF1P30408 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.5■□□□□ 0.87
TM4SF1P30408 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
TM4SF1P30408 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TM4SF1P30408 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
TM4SF1P30408 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TM4SF1P30408 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.49■□□□□ 0.87
TM4SF1P30408 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF1P30408 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF1P30408 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM4SF1P30408 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF1P30408 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.49■□□□□ 0.87
TM4SF1P30408 MIR4525-201ENST00000580000 75 ntBASIC20.49■□□□□ 0.87
TM4SF1P30408 AC133552.6-201ENST00000613406 534 ntBASIC20.49■□□□□ 0.87
TM4SF1P30408 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 CDC14C-201ENST00000428251 1719 ntBASIC20.49■□□□□ 0.87
TM4SF1P30408 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TM4SF1P30408 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.49■□□□□ 0.87
TM4SF1P30408 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.49■□□□□ 0.87
TM4SF1P30408 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM4SF1P30408 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF1P30408 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF1P30408 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF1P30408 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
TM4SF1P30408 AC234783.1-201ENST00000441761 496 ntBASIC20.48■□□□□ 0.87
TM4SF1P30408 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF1P30408 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.48■□□□□ 0.87
TM4SF1P30408 AL033527.5-201ENST00000641382 801 ntBASIC20.48■□□□□ 0.87
TM4SF1P30408 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
TM4SF1P30408 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.48■□□□□ 0.87
TM4SF1P30408 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TM4SF1P30408 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF1P30408 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.48■□□□□ 0.87
TM4SF1P30408 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF1P30408 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF1P30408 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF1P30408 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.47■□□□□ 0.87
TM4SF1P30408 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.47■□□□□ 0.87
TM4SF1P30408 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.47■□□□□ 0.87
TM4SF1P30408 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF1P30408 BNIP3P42-201ENST00000454982 569 ntBASIC20.47■□□□□ 0.87
TM4SF1P30408 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.47■□□□□ 0.87
TM4SF1P30408 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.47■□□□□ 0.87
TM4SF1P30408 MIR4538-201ENST00000581377 78 ntBASIC20.47■□□□□ 0.87
TM4SF1P30408 BNIP3P29-201ENST00000598302 571 ntBASIC20.47■□□□□ 0.87
TM4SF1P30408 AC011447.5-201ENST00000616168 564 ntBASIC20.47■□□□□ 0.87
TM4SF1P30408 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.47■□□□□ 0.87
TM4SF1P30408 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM4SF1P30408 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms