Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COL8A2P25067 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.12□□□□□ -0.15
COL8A2P25067 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
COL8A2P25067 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COL8A2P25067 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.11□□□□□ -0.15
COL8A2P25067 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COL8A2P25067 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 PMS2P4-201ENST00000412466 1052 ntBASIC14.11□□□□□ -0.15
COL8A2P25067 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.11□□□□□ -0.15
COL8A2P25067 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.11□□□□□ -0.15
COL8A2P25067 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COL8A2P25067 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 AC093520.2-201ENST00000561830 333 ntBASIC14.11□□□□□ -0.15
COL8A2P25067 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.11□□□□□ -0.15
COL8A2P25067 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 AL355385.1-201ENST00000606123 409 ntBASIC14.11□□□□□ -0.15
COL8A2P25067 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.11□□□□□ -0.15
COL8A2P25067 AKAP8P1-201ENST00000434743 1349 ntBASIC14.11□□□□□ -0.15
COL8A2P25067 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
COL8A2P25067 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL8A2P25067 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
COL8A2P25067 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL8A2P25067 AC023141.5-201ENST00000458585 616 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 HLA-J-203ENST00000494367 1087 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
COL8A2P25067 AC109322.1-201ENST00000524499 1264 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 AC109635.5-201ENST00000533593 962 ntBASIC14.1□□□□□ -0.15
COL8A2P25067 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
COL8A2P25067 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.1□□□□□ -0.15
COL8A2P25067 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms