Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.06□□□□□ -0.16
CXCL3P19876 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 AC009154.2-201ENST00000621177 724 ntBASIC14.06□□□□□ -0.16
CXCL3P19876 FAM197Y4-202ENST00000622692 608 ntBASIC14.06□□□□□ -0.16
CXCL3P19876 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 GGT3P-204ENST00000453783 1664 ntBASIC14.06□□□□□ -0.16
CXCL3P19876 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CXCL3P19876 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CXCL3P19876 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CXCL3P19876 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCL3P19876 AC096633.1-201ENST00000422446 749 ntBASIC14.05□□□□□ -0.16
CXCL3P19876 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCL3P19876 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 PVRIG2P-201ENST00000435460 978 ntBASIC14.05□□□□□ -0.16
CXCL3P19876 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.05□□□□□ -0.16
CXCL3P19876 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 AC019129.2-201ENST00000609837 1235 ntBASIC14.05□□□□□ -0.16
CXCL3P19876 DGCR10-201ENST00000609839 495 ntBASIC14.05□□□□□ -0.16
CXCL3P19876 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CXCL3P19876 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CXCL3P19876 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CXCL3P19876 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CXCL3P19876 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms