Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC015922.1-201ENST00000421102 1152 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 INGX-202ENST00000489074 768 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 RNA5SP421-201ENST00000516864 134 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 AC107918.2-201ENST00000530817 355 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFAP04085 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 AC243562.1-201ENST00000560672 389 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 AC051619.7-201ENST00000568314 623 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.69■□□□□ 0.1
PDGFAP04085 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDGFAP04085 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 AC129492.6-201ENST00000611383 1305 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 AC236430.1-201ENST00000402231 743 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 GPS2P2-201ENST00000430745 888 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 AC055876.3-201ENST00000431496 288 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 UGT1A2P-201ENST00000454886 866 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 AC069335.1-201ENST00000489972 472 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 FAM86C2P-203ENST00000528684 1004 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.68■□□□□ 0.1
PDGFAP04085 AC190387.1-201ENST00000551683 408 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 AC138649.4-201ENST00000612222 287 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.68■□□□□ 0.1
PDGFAP04085 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 PCDHA1-201ENST00000378133 2726 ntBASIC15.68■□□□□ 0.1
PDGFAP04085 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDGFAP04085 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PDGFAP04085 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFAP04085 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFAP04085 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 REXO1L11P-201ENST00000620964 1927 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFAP04085 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFAP04085 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.67■□□□□ 0.1
PDGFAP04085 TFAMP1-201ENST00000412727 736 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 CNN2P2-201ENST00000443536 909 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.67■□□□□ 0.1
PDGFAP04085 CNN2P3-201ENST00000450201 906 ntBASIC15.67■□□□□ 0.1
PDGFAP04085 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFAP04085 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms