Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.71■□□□□ 0.59
GGPS1O95749 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
GGPS1O95749 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.7■□□□□ 0.58
GGPS1O95749 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GGPS1O95749 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GGPS1O95749 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
GGPS1O95749 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.7■□□□□ 0.58
GGPS1O95749 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GGPS1O95749 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.7■□□□□ 0.58
GGPS1O95749 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 AC142381.1-201ENST00000426099 345 ntBASIC18.7■□□□□ 0.58
GGPS1O95749 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.7■□□□□ 0.58
GGPS1O95749 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.7■□□□□ 0.58
GGPS1O95749 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.7■□□□□ 0.58
GGPS1O95749 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.7■□□□□ 0.58
GGPS1O95749 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.7■□□□□ 0.58
GGPS1O95749 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.7■□□□□ 0.58
GGPS1O95749 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
GGPS1O95749 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.7■□□□□ 0.58
GGPS1O95749 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GGPS1O95749 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GGPS1O95749 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.69■□□□□ 0.58
GGPS1O95749 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.69■□□□□ 0.58
GGPS1O95749 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.69■□□□□ 0.58
GGPS1O95749 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 AC105233.2-201ENST00000523697 349 ntBASIC18.69■□□□□ 0.58
GGPS1O95749 AF228730.5-201ENST00000530288 346 ntBASIC18.69■□□□□ 0.58
GGPS1O95749 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.69■□□□□ 0.58
GGPS1O95749 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 AC140878.1-201ENST00000565277 250 ntBASIC18.69■□□□□ 0.58
GGPS1O95749 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.69■□□□□ 0.58
GGPS1O95749 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.69■□□□□ 0.58
GGPS1O95749 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GGPS1O95749 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.69■□□□□ 0.58
GGPS1O95749 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GGPS1O95749 FO538757.1-201ENST00000623083 1397 ntBASIC18.68■□□□□ 0.58
GGPS1O95749 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 TREML5P-201ENST00000421694 576 ntBASIC18.68■□□□□ 0.58
GGPS1O95749 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.68■□□□□ 0.58
GGPS1O95749 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.68■□□□□ 0.58
GGPS1O95749 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.68■□□□□ 0.58
GGPS1O95749 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 RNA5SP421-201ENST00000516864 134 ntBASIC18.68■□□□□ 0.58
GGPS1O95749 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.68■□□□□ 0.58
GGPS1O95749 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.68■□□□□ 0.58
GGPS1O95749 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.68■□□□□ 0.58
GGPS1O95749 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.68■□□□□ 0.58
GGPS1O95749 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GGPS1O95749 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms